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SRX12412524: SHAPE-MaP of no ligand_Untreated
1 ILLUMINA (Illumina MiniSeq) run: 75,860 spots, 22.9M bases, 11.9Mb downloads

Design: SHAPE-MaP libraries using SSRTII
Submitted by: National Cancer Institute
Study: Structure probing coupled with AI augmented-molecular simulations.
PRJNA767082 • SRP339476 • All experiments • All runs
show Abstracthide Abstract
The study aims to understand RNA-small molecule interactions utilizing the experimental structure probing techniques coupled to AI augmented-molecular simulations. The system used in the study is a robust PreQ1- riboswitch system from T. tengcongensis with cognate and synthetic ligand.
Sample:
SAMN21886514 • SRS10380351 • All experiments • All runs
Organism: Caldanaerobacter subterraneus subsp. tengcongensis
Library:
Name: TT_DMSO_Untreated
Instrument: Illumina MiniSeq
Strategy: AMPLICON
Source: SYNTHETIC
Selection: RT-PCR
Layout: PAIRED
Runs: 1 run, 75,860 spots, 22.9M bases, 11.9Mb
Run# of Spots# of BasesSizePublished
SRR1612711475,86022.9M11.9Mb2022-10-31

ID:
16823641

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